BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012B08SP1|AL426323
(750 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1793 1455 0.0
>3x_Contig1793
Length = 40499
Score = 1455 bits (726), Expect = 0.0
Identities = 738/750 (98%)
Strand = Plus / Plus
Query: 1 ctgcaattatttgtcktgatgtagagagataatccaatggcacgacactgaacattgcca 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30349 ctgcaattatttgtcttgatgtagagagataatccaatggcacgacactgaacattgcca 30408
Query: 61 atacactttcctccaaatgccagtytggatatacatgttcaataacctctcgatagtacc 120
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 30409 atacactttcctccaaatgccagtttggatatacatgttcaataacctctcgatagtacc 30468
Query: 121 acaaaattaataaggttccaatatacgagcccaggtattgtcccataaaataaacaccta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30469 acaaaattaataaggttccaatatacgagcccaggtattgtcccataaaataaacaccta 30528
Query: 181 attttctccaagggaatcctctataaacaaaatttgacaccgtaattgctggattcagat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30529 attttctccaagggaatcctctataaacaaaatttgacaccgtaattgctggattcagat 30588
Query: 241 gtgcacccgaaattgcactaccacctgctgcaaaataacccattaccacagccgcagccc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30589 gtgcacccgaaattgcactaccacctgctgcaaaataacccattaccacagccgcagccc 30648
Query: 301 aaccaaaggcaacagttgcgaaattacctgcmacatctggagttgcaagatattgcagca 360
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 30649 aaccaaaggcaacagttgcgaaattacctgcaacatctggagttgcaagatattgcagca 30708
Query: 361 tagctatttgaycagactccatgttattcaactgaataatttgattaaatttgttaattt 420
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30709 tagctatttgatcagactccatgttattcaactgaataatttgattaaatttgttaattt 30768
Query: 421 gattttgttgtgaaagtttcctttgacagttaacagcagtaccaaacatcatcataatca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30769 gattttgttgtgaaagtttcctttgacagttaacagcagtaccaaacatcatcataatca 30828
Query: 481 tggtacctaamaactcaccgaaaaaytccttcatgtgttggtacttaaacgatgaccact 540
|||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 30829 tggtacctaaaaactcaccgaaaaattccttcatgtgttggtacttaaacgatgaccact 30888
Query: 541 tattgaycggataayatgtcgaaggtaaaactgtgggtgtttgagggttttgatatammg 600
|||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 30889 tattgatcggataatatgtcgaaggtaaaactgtgggtgtttgagggttttgatataaag 30948
Query: 601 tctttggtttcaccatcatagtcacggcaccattcacgttgctcggmtcatttggmtctg 660
|||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 30949 tctttggtttcaccatcatagtcacggcaccattcacgttgctcggatcatttggatctg 31008
Query: 661 ctgcagtttgactgttttgattaggtcccgtcgtcgatctagacatcacggatcccggac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31009 ctgcagtttgactgttttgattaggtcccgtcgtcgatctagacatcacggatcccggac 31068
Query: 721 cttctgtaggcctaggtggcatgacgttag 750
||||||||||||||||||||||||||||||
Sbjct: 31069 cttctgtaggcctaggtggcatgacgttag 31098
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4481
Number of Sequences: 1807
Number of extensions: 4481
Number of successful extensions: 98
Number of sequences better than 1.0e-20: 1
length of query: 750
length of database: 10,358,551
effective HSP length: 16
effective length of query: 734
effective length of database: 10,329,639
effective search space: 7581955026
effective search space used: 7581955026
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.7 bits)